- Predicted Gene MLOC_73160
MLOC_73160 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.2215 | 24.4474 | 21.3128 | 19.5379 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 27.4973 | 20.6129 | 20.1112 | 19.5939 |
| INF1 | Young developing inflorescences (5mm) | 85.6121 | 82.482 | 83.219 | 67.1949 |
| INF2 | Developing inflorescences (1-1.5 cm) | 121.738 | 127.259 | 110.912 | 125.107 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.6771 | 26.2565 | 18.7756 | 28.1181 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.21827 | 12.2373 | 11.7678 | 38.3675 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 62.6813 | 50.9963 | 62.8991 | 52.5714 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 29.4629 | 29.0883 | 32.1707 | 61.8185 |
CDS Structure of MLOC_73160
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73160.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05860.1 |
-1 |
0.0 |
2608 |
1309/1422 (92%) |
13105.m00623 protein retrotransposon protein, putative, unclassified, expressed |
| TAIR PP10 |
AT4G35800.1 |
-1 |
0.0 |
2487 |
1227/1421 (86%) |
| Symbols: NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS, RNA_POL_II_LS | RNA polymerase II large subunit | chr4:16961115-16967892 REVERSE LENGTH=1839 |