MLOC_73147 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.09768.9680411.161911.1229
LEAShoots from the seedlings (10 cm shoot stage)0.1350330.2536530.2683330.170652
INF1Young developing inflorescences (5mm)0.4844050.4732790.449120.441296
INF2Developing inflorescences (1-1.5 cm)0.3219330.1755930.2873840.30576
ROORoots from the seedlings (10 cm shoot stage)6.974742.737933.505353.49603
NODDeveloping tillers at six leaf stage, 3rd internode0.3792670.4116910.8144551.27541
CAR5Developing grain, bracts removed (5 DPA)1.698932.175021.111511.84545
CAR15Developing grain, bracts removed (15 DPA)1.102790.5540231.077422.3424



CDS Structure of MLOC_73147






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73147.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368107NoneNoneNoneNone
MLOC_73147.2CUST_6235_PI427708080AvailableAvailablecontig_63060 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g30360.1 +2 4e-115 339 192/238 (81%) 13109.m03032 protein caffeoyl-CoA O-methyltransferase, putative, expressed
TAIR PP10 AT4G34050.1 +2 7e-75 235 122/228 (54%) | Symbols: CCoAOMT1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:16310844-16311973 FORWARD LENGTH=259