MLOC_73125 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.9413.501910.357812.2893
LEAShoots from the seedlings (10 cm shoot stage)14.076714.930911.985211.6713
INF1Young developing inflorescences (5mm)14.856415.846418.798615.2159
INF2Developing inflorescences (1-1.5 cm)22.307519.830722.3925.574
ROORoots from the seedlings (10 cm shoot stage)7.7501613.887219.331217.5913
NODDeveloping tillers at six leaf stage, 3rd internode18.01712.979527.249444.1405
CAR5Developing grain, bracts removed (5 DPA)14.825113.084712.341414.5498
CAR15Developing grain, bracts removed (15 DPA)9.402075.65297.1622519.4965



CDS Structure of MLOC_73125






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73125.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73125.2CUST_13154_PI427708083AvailableAvailablecontig_63029 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01700.1 +1 8e-21 91 42/44 (95%) 13106.m00081 protein CWC15 homolog A, putative, expressed
TAIR PP10 AT3G13200.1 +1 4e-20 88 40/44 (91%) | Symbols: EMB2769 | Cwf15 / Cwc15 cell cycle control family protein | chr3:4242239-4243976 FORWARD LENGTH=230