MLOC_73112 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04764460.04070840.05291750.04634
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.7511681.208690.589150.914159
CAR15Developing grain, bracts removed (15 DPA)14.380313.639716.819838.5213



CDS Structure of MLOC_73112






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73112.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73112.1CUST_15880_PI427708080AvailableAvailablecontig_62992 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g06070.1 +1 1e-45 164 106/302 (35%) 13105.m00646 protein E3 ubiquitin-protein ligase SINA-like, putative
TAIR PP10None-----