MLOC_7311 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.146 | 8.1379 | 9.68095 | 8.98835 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.29637 | 12.1085 | 6.90003 | 6.90169 |
| INF1 | Young developing inflorescences (5mm) | 7.59169 | 9.84832 | 10.8172 | 8.28594 |
| INF2 | Developing inflorescences (1-1.5 cm) | 27.174 | 16.9458 | 25.6819 | 24.8881 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.4786 | 15.3108 | 17.4925 | 19.174 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.98439 | 9.05283 | 13.8096 | 30.769 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 59.6592 | 59.463 | 54.9816 | 57.0443 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 76.4568 | 83.7778 | 75.4759 | 189.169 |
CDS Structure of MLOC_7311
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7311.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g65920.2 |
+1 |
0.0 |
548 |
317/383 (83%) |
13101.m07131 protein F-box/LRR-repeat protein 2, putative, expressed |
| TAIR PP10 |
AT1G21410.1 |
+1 |
3e-135 |
404 |
218/323 (67%) |
| Symbols: SKP2A | F-box/RNI-like superfamily protein | chr1:7497479-7499386 FORWARD LENGTH=360 |
