MLOC_73105 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains54.370146.937346.594958.4041
LEAShoots from the seedlings (10 cm shoot stage)28.859311.201715.089516.4398
INF1Young developing inflorescences (5mm)19.951717.709515.585617.5917
INF2Developing inflorescences (1-1.5 cm)13.452415.057115.095919.2984
ROORoots from the seedlings (10 cm shoot stage)45.676735.480937.645853.4097
NODDeveloping tillers at six leaf stage, 3rd internode32.435728.429318.386688.4153
CAR5Developing grain, bracts removed (5 DPA)20.43224.762921.301427.6923
CAR15Developing grain, bracts removed (15 DPA)3.248092.741532.877188.32593



CDS Structure of MLOC_73105






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73105.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250885.1NoneNoneNoneNone
MLOC_73105.1CUST_6230_PI427708080AvailableAvailablecontig_62966 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g41340.1 -1 5e-138 397 200/217 (92%) 13108.m04436 protein ras-related protein, putative, expressed
TAIR PP10 AT2G43130.1 -1 1e-112 332 168/214 (79%) | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:17929899-17930904 REVERSE LENGTH=214