MLOC_7310 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.22652.730982.546272.72532
LEAShoots from the seedlings (10 cm shoot stage)2.769313.334922.636612.3489
INF1Young developing inflorescences (5mm)41.286746.368443.152140.333
INF2Developing inflorescences (1-1.5 cm)79.389567.931461.9982.8488
ROORoots from the seedlings (10 cm shoot stage)1.775913.017047.32664.02632
NODDeveloping tillers at six leaf stage, 3rd internode0.8558770.5748472.050582.34618
CAR5Developing grain, bracts removed (5 DPA)0.482380.2668330.4425120.410904
CAR15Developing grain, bracts removed (15 DPA)0.3705790.1658370.3743060.753451



CDS Structure of MLOC_7310






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7310.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7310.1CUST_9817_PI427708083AvailableAvailablecontig_138983 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39410.1 -3 3e-27 106 56/79 (71%) 13110.m03607 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
TAIR PP10 AT5G59970.1 -3 1e-27 106 56/79 (71%) Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103