MLOC_73062 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains85.940785.517984.433389.1311
LEAShoots from the seedlings (10 cm shoot stage)81.324686.019878.516170.6612
INF1Young developing inflorescences (5mm)58.60368.374163.226955.2422
INF2Developing inflorescences (1-1.5 cm)48.658958.527754.046860.1884
ROORoots from the seedlings (10 cm shoot stage)49.579275.907672.74289.0822
NODDeveloping tillers at six leaf stage, 3rd internode87.5781.1803106.961287.157
CAR5Developing grain, bracts removed (5 DPA)58.647864.167358.762860.4866
CAR15Developing grain, bracts removed (15 DPA)8.456717.761518.5176619.8119



CDS Structure of MLOC_73062






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73062.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250891.1NoneNoneNoneNone
MLOC_73062.1CUST_6225_PI427708080AvailableAvailablecontig_62875 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g33710.1 +1 0.0 808 383/428 (89%) 13102.m03658 protein decarboxylase, putative, expressed
TAIR PP10 AT1G43710.1 +1 0.0 747 351/430 (82%) | Symbols: emb1075 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:16486534-16488298 REVERSE LENGTH=482