MLOC_73052 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.44435.550329.398135.6211
LEAShoots from the seedlings (10 cm shoot stage)183.562228.628249.985183.681
INF1Young developing inflorescences (5mm)53.8551.906160.030452.8095
INF2Developing inflorescences (1-1.5 cm)35.572538.88851.34751.5013
ROORoots from the seedlings (10 cm shoot stage)3.814319.0254917.737111.7637
NODDeveloping tillers at six leaf stage, 3rd internode202.968205.751324.787629.138
CAR5Developing grain, bracts removed (5 DPA)143.463124.581121.335145.545
CAR15Developing grain, bracts removed (15 DPA)29.233334.903333.067490.5283



CDS Structure of MLOC_73052






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73052.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373508NoneNoneNoneNone
MLOC_73052.1CUST_6224_PI427708080AvailableAvailablecontig_62845 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g51080.1 -2 0.0 774 406/447 (91%) 13102.m05803 protein FAD binding domain containing protein, expressed
TAIR PP10 AT1G74470.1 -2 0.0 642 336/435 (77%) Pyridine nucleotide-disulphide oxidoreductase family protein | chr1:27991248-27992845 FORWARD LENGTH=467