MLOC_73050 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains43.014847.280736.559449.4113
LEAShoots from the seedlings (10 cm shoot stage)618.6641127.651253.61888.098
INF1Young developing inflorescences (5mm)26.381318.328727.182523.2297
INF2Developing inflorescences (1-1.5 cm)15.342417.337419.238722.3639
ROORoots from the seedlings (10 cm shoot stage)5.664687.4849716.31911.3423
NODDeveloping tillers at six leaf stage, 3rd internode464.176499.584610.391490.38
CAR5Developing grain, bracts removed (5 DPA)116.961145.195109.33148.757
CAR15Developing grain, bracts removed (15 DPA)9.5033213.475310.604632.6331



CDS Structure of MLOC_73050






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73050.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367977NoneNoneNoneNone
MLOC_73050.2CUST_6223_PI427708080AvailableAvailablecontig_62844 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g25430.1 +2 3e-33 121 104/150 (69%) 13107.m02512 protein photosystem I reaction center subunit IV A, chloroplast precursor, putative, expressed
TAIR PP10 AT2G20260.1 +2 3e-25 99 79/143 (55%) | Symbols: PSAE-2 | photosystem I subunit E-2 | chr2:8736780-8737644 FORWARD LENGTH=145