MLOC_73044 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.18460800.0915849
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.073210100.08210560.0502748
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.092930.9008710.8926930.93155
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_73044






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73044.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73044.1CUST_15874_PI427708080AvailableAvailablecontig_62838 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g17730.1 +2 3e-34 128 63/101 (62%) 13106.m01946 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT1G48940.1 +2 5e-28 109 50/99 (51%) | Symbols: ENODL6, AtENODL6 | early nodulin-like protein 6 | chr1:18105808-18106422 REVERSE LENGTH=177