MLOC_73036 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.030813.52312.748112.3596
LEAShoots from the seedlings (10 cm shoot stage)4.638090.2804780.8849651.70884
INF1Young developing inflorescences (5mm)17.412215.8610.586112.3591
INF2Developing inflorescences (1-1.5 cm)11.449115.992512.794514.2893
ROORoots from the seedlings (10 cm shoot stage)4.707967.209597.483867.61843
NODDeveloping tillers at six leaf stage, 3rd internode2.867012.543380.2089236.82689
CAR5Developing grain, bracts removed (5 DPA)9.224169.475358.606848.30349
CAR15Developing grain, bracts removed (15 DPA)1.759431.309981.567633.48962



CDS Structure of MLOC_73036






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73036.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73036.2CUST_15873_PI427708080AvailableAvailablecontig_6282 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g40860.1 -2 0.0 685 399/498 (80%) 13112.m04256 protein Leucine Rich Repeat family protein, expressed
TAIR PP10 AT3G54650.1 -2 3e-126 388 230/437 (53%) | Symbols: FBL17 | RNI-like superfamily protein | chr3:20226004-20228882 REVERSE LENGTH=593