MLOC_73035 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.681415.34312.999813.9777
LEAShoots from the seedlings (10 cm shoot stage)12.203310.653113.863710.798
INF1Young developing inflorescences (5mm)7.175748.4341611.26717.13257
INF2Developing inflorescences (1-1.5 cm)10.75810.179812.913811.8383
ROORoots from the seedlings (10 cm shoot stage)12.745812.335712.638515.6378
NODDeveloping tillers at six leaf stage, 3rd internode13.986215.29720.262958.178
CAR5Developing grain, bracts removed (5 DPA)6.014597.376986.184036.38005
CAR15Developing grain, bracts removed (15 DPA)8.87218.031958.9041119.2495



CDS Structure of MLOC_73035






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73035.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355556NoneNoneNoneNone
MLOC_73035.1CUST_6222_PI427708080AvailableAvailablecontig_6282 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g40880.1 -1 1e-154 446 230/297 (77%) 13112.m04258 protein phosphoribulokinase/Uridine kinase family protein, expressed
TAIR PP10 AT1G03030.1 -1 1e-113 340 160/249 (64%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:701621-703568 FORWARD LENGTH=301