MLOC_73012 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.3361415.482213.882312.6452
LEAShoots from the seedlings (10 cm shoot stage)8.943084.154463.423264.68111
INF1Young developing inflorescences (5mm)11.19989.91989.246698.02351
INF2Developing inflorescences (1-1.5 cm)9.4157510.943312.206111.0253
ROORoots from the seedlings (10 cm shoot stage)2.393235.450556.777465.80767
NODDeveloping tillers at six leaf stage, 3rd internode6.842374.707614.2965315.1973
CAR5Developing grain, bracts removed (5 DPA)22.910321.610921.983220.4059
CAR15Developing grain, bracts removed (15 DPA)2.260471.409492.629694.39937



CDS Structure of MLOC_73012






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73012.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73012.1CUST_15871_PI427708080AvailableAvailablecontig_62787 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g21250.1 -3 0.0 882 493/634 (78%) 13103.m02545 protein glycosyl transferase, family 8, putative, expressed
TAIR PP10 AT2G38650.2 -3 3e-150 462 288/626 (46%) | Symbols: GAUT7 | galacturonosyltransferase 7 | chr2:16161856-16165523 REVERSE LENGTH=619