- Predicted Gene MLOC_72940
MLOC_72940 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.77712 | 2.20397 | 2.02242 | 2.19941 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.17869 | 2.69388 | 3.25269 | 2.5338 |
| INF1 | Young developing inflorescences (5mm) | 2.76118 | 4.2875 | 3.33996 | 3.27352 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.75523 | 2.20767 | 2.209 | 2.86469 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.03988 | 7.45323 | 9.06925 | 9.24632 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.71164 | 7.38393 | 11.7811 | 24.1881 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.892004 | 1.06998 | 0.873371 | 1.03615 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.224872 | 0.279354 | 0.346951 | 0.757748 |
CDS Structure of MLOC_72940
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72940.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g53990.1 |
+1 |
2e-125 |
384 |
271/474 (57%) |
13104.m05576 protein ethylene-responsive protein related, putative, expressed |
| TAIR PP10 |
AT3G20640.1 |
+1 |
6e-43 |
162 |
103/211 (49%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:7210654-7213199 REVERSE LENGTH=454 |