MLOC_72931 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.3395116.379411.534112.1362
LEAShoots from the seedlings (10 cm shoot stage)13.417110.714210.92339.75888
INF1Young developing inflorescences (5mm)18.969917.872716.750515.2587
INF2Developing inflorescences (1-1.5 cm)18.565315.685416.451918.7945
ROORoots from the seedlings (10 cm shoot stage)3.6783912.57119.0700512.6807
NODDeveloping tillers at six leaf stage, 3rd internode4.280935.181374.0318716.1648
CAR5Developing grain, bracts removed (5 DPA)16.305616.276216.828816.4458
CAR15Developing grain, bracts removed (15 DPA)11.212211.55429.9423626.0428



CDS Structure of MLOC_72931






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72931.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72931.1CUST_9795_PI427708083AvailableAvailablecontig_62646 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g28310.1 +3 4e-72 242 150/190 (79%) 13103.m03304 protein dnaJ domain containing protein, expressed
TAIR PP10 AT5G37380.5 +3 5e-38 142 97/186 (52%) Chaperone DnaJ-domain superfamily protein | chr5:14817035-14818330 REVERSE LENGTH=431