- Predicted Gene MLOC_72928
MLOC_72928 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72928_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_72928_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 16.2248 | 15.6344 | 13.3924 | 17.9723 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 140.52 | 206.523 | 214.657 | 181.358 |
INF1 | Young developing inflorescences (5mm) | 11.7766 | 11.3195 | 11.3935 | 11.4437 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.89671 | 9.38059 | 10.3622 | 12.5285 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.4605 | 14.2548 | 11.6545 | 19.7066 |
NOD | Developing tillers at six leaf stage, 3rd internode | 44.1187 | 57.6767 | 62.019 | 210.653 |
CAR5 | Developing grain, bracts removed (5 DPA) | 36.0562 | 38.0507 | 37.4182 | 45.4632 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.58737 | 9.27445 | 8.19597 | 24.4133 |
CDS Structure of MLOC_72928
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72928.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g51029.1 |
-1 |
0.0 |
939 |
524/549 (95%) |
13106.m05493 protein OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed |
TAIR PP10 |
AT1G50250.1 |
-1 |
0.0 |
900 |
502/548 (92%) |
| Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-18616930 REVERSE LENGTH=716 |