MLOC_7292 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 240.124 | 178.1 | 221.325 | 211.84 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 138.502 | 244.775 | 185.906 | 160.646 |
| INF1 | Young developing inflorescences (5mm) | 66.1117 | 74.9993 | 79.2407 | 65.9927 |
| INF2 | Developing inflorescences (1-1.5 cm) | 78.0133 | 72.4363 | 82.2033 | 86.2126 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 371.215 | 329.646 | 375.826 | 415.144 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 310.268 | 324.001 | 412.15 | 1064.12 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 110.089 | 125.384 | 112.982 | 118.441 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 56.3992 | 64.698 | 54.5189 | 144.454 |
CDS Structure of MLOC_7292
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7292.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g55150.6 |
-2 |
6e-99 |
295 |
138/160 (86%) |
13103.m13020 protein eukaryotic translation initiation factor 5A, putative, expressed |
| TAIR PP10 |
AT1G69410.1 |
-2 |
8e-90 |
270 |
131/160 (82%) |
| Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158 |
