MLOC_72861 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.565753.782514.844764.94946
LEAShoots from the seedlings (10 cm shoot stage)4.9639420.62855.7180810.6062
INF1Young developing inflorescences (5mm)0.02561210.05705550.1622770.0978866
INF2Developing inflorescences (1-1.5 cm)0.17859400.06334490.136276
ROORoots from the seedlings (10 cm shoot stage)2.273043.251124.322134.78653
NODDeveloping tillers at six leaf stage, 3rd internode0.6666860.7762281.390273.55752
CAR5Developing grain, bracts removed (5 DPA)0.7651961.405711.28251.51639
CAR15Developing grain, bracts removed (15 DPA)0.4751260.6747620.146681.36389



CDS Structure of MLOC_72861






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72861.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251269.1NoneNoneNoneNone
MLOC_72861.1CUST_6208_PI427708080AvailableAvailablecontig_62510 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g06500.2 -1 5e-104 312 159/210 (76%) 13101.m14931 protein PHLOEM 2-LIKE A5, putative, expressed
TAIR PP10 AT4G19840.1 -1 1e-55 187 95/183 (52%) | Symbols: ATPP2-A1, ATPP2A-1, PP2-A1 | phloem protein 2-A1 | chr4:10774336-10775701 FORWARD LENGTH=246