MLOC_72860 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains68.21767.833866.462563.1737
LEAShoots from the seedlings (10 cm shoot stage)37.624929.617431.274825.6339
INF1Young developing inflorescences (5mm)24.710528.147730.904622.4267
INF2Developing inflorescences (1-1.5 cm)15.715818.117118.355518.2662
ROORoots from the seedlings (10 cm shoot stage)48.36441.198337.639744.6478
NODDeveloping tillers at six leaf stage, 3rd internode29.426828.001624.661981.1306
CAR5Developing grain, bracts removed (5 DPA)37.538340.439339.797536.5504
CAR15Developing grain, bracts removed (15 DPA)4.934784.540773.5939310.4454



CDS Structure of MLOC_72860






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72860.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361416NoneNoneNoneNone
MLOC_72860.1CUST_6207_PI427708080AvailableAvailablecontig_62510 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g06490.1 +1 0.0 809 379/434 (87%) 13101.m00639 protein OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
TAIR PP10 AT3G07990.1 +1 0.0 610 282/427 (66%) | Symbols: SCPL27 | serine carboxypeptidase-like 27 | chr3:2552544-2554644 FORWARD LENGTH=459