- Predicted Gene MLOC_72831
MLOC_72831 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.33135 | 5.72415 | 4.831 | 5.28575 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.89102 | 4.87097 | 5.55888 | 3.75683 |
| INF1 | Young developing inflorescences (5mm) | 5.07827 | 4.92123 | 5.76135 | 4.12564 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.16325 | 4.10787 | 4.04843 | 4.22443 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.74318 | 3.81993 | 3.54985 | 4.02888 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.97802 | 3.73142 | 5.5399 | 10.1914 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.02748 | 5.01246 | 6.60894 | 5.30772 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.87909 | 1.77274 | 2.00544 | 4.1854 |
CDS Structure of MLOC_72831
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72831.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g06520.1 |
+1 |
3e-54 |
191 |
161/201 (80%) |
13112.m00669 protein bZIP transcription factor domain containing protein, expressed |
| TAIR PP10 |
AT1G43700.1 |
+1 |
2e-21 |
96 |
65/119 (55%) |
| Symbols: VIP1, SUE3 | VIRE2-interacting protein 1 | chr1:16484352-16486017 FORWARD LENGTH=341 |