MLOC_72831 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.331355.724154.8315.28575
LEAShoots from the seedlings (10 cm shoot stage)4.891024.870975.558883.75683
INF1Young developing inflorescences (5mm)5.078274.921235.761354.12564
INF2Developing inflorescences (1-1.5 cm)4.163254.107874.048434.22443
ROORoots from the seedlings (10 cm shoot stage)4.743183.819933.549854.02888
NODDeveloping tillers at six leaf stage, 3rd internode4.978023.731425.539910.1914
CAR5Developing grain, bracts removed (5 DPA)6.027485.012466.608945.30772
CAR15Developing grain, bracts removed (15 DPA)1.879091.772742.005444.1854



CDS Structure of MLOC_72831






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72831.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72831.1NoneAvailableAvailablecontig_62469 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g06520.1 +1 3e-54 191 161/201 (80%) 13112.m00669 protein bZIP transcription factor domain containing protein, expressed
TAIR PP10 AT1G43700.1 +1 2e-21 96 65/119 (55%) | Symbols: VIP1, SUE3 | VIRE2-interacting protein 1 | chr1:16484352-16486017 FORWARD LENGTH=341