- Predicted Gene MLOC_72822
MLOC_72822 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.03157 | 8.84901 | 9.06878 | 7.56217 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.86441 | 12.5577 | 14.8338 | 8.4625 |
| INF1 | Young developing inflorescences (5mm) | 11.1721 | 14.4196 | 14.5664 | 10.9077 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.5743 | 16.6361 | 19.4038 | 18.8051 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.1633 | 8.91715 | 11.3056 | 8.89981 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.8747 | 4.37358 | 7.34444 | 11.4159 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.9849 | 16.8805 | 16.8083 | 14.9233 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.82908 | 3.77188 | 2.75712 | 7.273 |
CDS Structure of MLOC_72822
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72822.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g35260.1 |
+3 |
1e-88 |
290 |
215/407 (53%) |
13105.m03685 protein PB1 domain containing protein, expressed |
| TAIR PP10 | None | - | - | - | - | - |
