MLOC_72785 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.775228.258425.596630.3055
LEAShoots from the seedlings (10 cm shoot stage)32.642630.19828.553725.9422
INF1Young developing inflorescences (5mm)30.537325.889127.007325.798
INF2Developing inflorescences (1-1.5 cm)26.699329.350734.876335.8248
ROORoots from the seedlings (10 cm shoot stage)33.589443.420243.318152.9286
NODDeveloping tillers at six leaf stage, 3rd internode57.659533.86839.2352109.185
CAR5Developing grain, bracts removed (5 DPA)19.256121.339622.829123.1553
CAR15Developing grain, bracts removed (15 DPA)6.85857.366767.5524117.9853



CDS Structure of MLOC_72785






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72785.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248893.1NoneNoneNoneNone
MLOC_72785.3CUST_6195_PI427708080AvailableAvailablecontig_62361 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g32274.1 +3 4e-21 87 41/44 (93%) 13109.m03211 protein 30S ribosomal protein S16, putative, expressed
TAIR PP10 AT5G56940.1 +3 5e-20 84 38/44 (86%) Ribosomal protein S16 family protein | chr5:23030879-23032200 FORWARD LENGTH=135