- Predicted Gene MLOC_72785
MLOC_72785 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 30.7752 | 28.2584 | 25.5966 | 30.3055 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.6426 | 30.198 | 28.5537 | 25.9422 |
| INF1 | Young developing inflorescences (5mm) | 30.5373 | 25.8891 | 27.0073 | 25.798 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.6993 | 29.3507 | 34.8763 | 35.8248 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 33.5894 | 43.4202 | 43.3181 | 52.9286 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 57.6595 | 33.868 | 39.2352 | 109.185 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.2561 | 21.3396 | 22.8291 | 23.1553 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.8585 | 7.36676 | 7.55241 | 17.9853 |
CDS Structure of MLOC_72785
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72785.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g32274.1 |
+3 |
4e-21 |
87 |
41/44 (93%) |
13109.m03211 protein 30S ribosomal protein S16, putative, expressed |
| TAIR PP10 |
AT5G56940.1 |
+3 |
5e-20 |
84 |
38/44 (86%) |
Ribosomal protein S16 family protein | chr5:23030879-23032200 FORWARD LENGTH=135 |