MLOC_72783 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.122033.577813.636053.23763
LEAShoots from the seedlings (10 cm shoot stage)3.147920.7500490.7585541.30032
INF1Young developing inflorescences (5mm)4.066653.153412.464092.63595
INF2Developing inflorescences (1-1.5 cm)3.77814.971574.678584.53651
ROORoots from the seedlings (10 cm shoot stage)2.131231.918341.871612.06597
NODDeveloping tillers at six leaf stage, 3rd internode0.1805250.28960.3111760.776232
CAR5Developing grain, bracts removed (5 DPA)1.325391.146410.9072191.05242
CAR15Developing grain, bracts removed (15 DPA)0.1766610.1144850.1481730.333717



CDS Structure of MLOC_72783






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72783.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72783.2CUST_15842_PI427708080AvailableAvailablecontig_6236 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58420.1 +1 4e-111 356 230/334 (69%) 13104.m06135 protein MLO domain containing protein, putative, expressed
TAIR PP10 AT1G26700.1 +1 2e-179 546 307/474 (65%) | Symbols: MLO14, ATMLO14 | Seven transmembrane MLO family protein | chr1:9228300-9232237 FORWARD LENGTH=554