MLOC_72770 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.780131.576021.954912.04664
LEAShoots from the seedlings (10 cm shoot stage)0.1291940.1871810.1052330.131099
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.08449750.11696300.219619
NODDeveloping tillers at six leaf stage, 3rd internode00.02070850.006106770.103147
CAR5Developing grain, bracts removed (5 DPA)0.1177720.03719570.03927040.0694126
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_72770






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72770.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375643NoneNoneNoneNone
MLOC_72770.1CUST_6194_PI427708080AvailableAvailablecontig_62331 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g04170.1 +1 0.0 796 410/484 (85%) 13111.m00364 protein CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT5G12180.1 +1 0.0 716 367/479 (77%) | Symbols: CPK17 | calcium-dependent protein kinase 17 | chr5:3937136-3939323 FORWARD LENGTH=528