MLOC_72748 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.092139700.159983
LEAShoots from the seedlings (10 cm shoot stage)0.4309911.045871.904180.836879
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.08106890.120533
ROORoots from the seedlings (10 cm shoot stage)2.234060.1091240.2553760.424171
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_72748






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72748.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72748.1CUST_9777_PI427708083AvailableAvailablecontig_62294 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04540.1 +3 3e-76 243 163/186 (88%) 13108.m00435 protein decarboxylase, putative, expressed
TAIR PP10 AT2G20340.1 +3 2e-30 117 77/163 (47%) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490