- Predicted Gene MLOC_72746
MLOC_72746 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.66753 | 2.95103 | 3.4785 | 2.83577 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.53439 | 4.62878 | 4.32514 | 3.54352 |
| INF1 | Young developing inflorescences (5mm) | 6.49798 | 6.97458 | 8.81082 | 6.13334 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.6241 | 10.0549 | 12.5319 | 11.6727 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.67346 | 3.46643 | 5.19866 | 3.72693 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.3518 | 3.08344 | 4.80966 | 9.28232 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.19745 | 6.77328 | 6.58624 | 5.67673 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.65351 | 1.80878 | 2.48428 | 4.32603 |
CDS Structure of MLOC_72746
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72746.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g46850.1 |
+1 |
6e-18 |
82 |
58/70 (83%) |
13101.m04819 protein expressed protein |
| TAIR PP10 |
AT2G46330.1 |
+1 |
3e-12 |
65 |
33/61 (54%) |
| Symbols: AGP16, ATAGP16 | arabinogalactan protein 16 | chr2:19018730-19019108 REVERSE LENGTH=73 |
