MLOC_72737 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.048530300.118677
LEAShoots from the seedlings (10 cm shoot stage)000.08006770.0899337
INF1Young developing inflorescences (5mm)0.0440968000.0415779
INF2Developing inflorescences (1-1.5 cm)0.04334240.039706200.0642406
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)2.646184.272163.245013.99247
CAR15Developing grain, bracts removed (15 DPA)134.616145.552120.381353.876



CDS Structure of MLOC_72737






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72737.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72737.1CUST_15839_PI427708080AvailableAvailablecontig_6226 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g29840.1 +1 6e-71 226 115/170 (68%) 13101.m03094 protein no apical meristem protein, putative, expressed
TAIR PP10 AT5G39610.1 +1 3e-74 232 122/205 (60%) | Symbols: ATNAC2, ORE1, ANAC092, ATNAC6, NAC2, NAC6 | NAC domain containing protein 6 | chr5:15858591-15859650 REVERSE LENGTH=285