MLOC_72726 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.212816.968417.451818.2052
LEAShoots from the seedlings (10 cm shoot stage)7.414431.877441.875983.16686
INF1Young developing inflorescences (5mm)64.666867.115380.243262.5934
INF2Developing inflorescences (1-1.5 cm)26.816834.292935.227235.5266
ROORoots from the seedlings (10 cm shoot stage)14.073917.149913.718617.685
NODDeveloping tillers at six leaf stage, 3rd internode5.14787.703232.7279719.2216
CAR5Developing grain, bracts removed (5 DPA)18.78918.479617.846217.568
CAR15Developing grain, bracts removed (15 DPA)1.218760.610811.699382.64411



CDS Structure of MLOC_72726






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72726.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357887NoneNoneNoneNone
MLOC_72726.2CUST_18427_PI427708080AvailableAvailablecontig_62088 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g60880.2 -1 0.0 965 498/529 (94%) 13103.m06689 protein nucleobase-ascorbate transporter, putative, expressed
TAIR PP10 AT5G62890.3 -1 0.0 783 396/526 (75%) Xanthine/uracil permease family protein | chr5:25243723-25247075 FORWARD LENGTH=532