- Predicted Gene MLOC_72715
MLOC_72715 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72715_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_72715_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 54.0815 | 46.6745 | 45.6175 | 49.5935 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 26.8096 | 23.213 | 19.242 | 19.9704 |
INF1 | Young developing inflorescences (5mm) | 39.8168 | 43.9642 | 36.7475 | 35.9976 |
INF2 | Developing inflorescences (1-1.5 cm) | 27.7591 | 27.6525 | 28.0404 | 31.6147 |
ROO | Roots from the seedlings (10 cm shoot stage) | 77.3344 | 48.6829 | 72.1239 | 67.4033 |
NOD | Developing tillers at six leaf stage, 3rd internode | 24.9982 | 20.8515 | 15.5188 | 67.3627 |
CAR5 | Developing grain, bracts removed (5 DPA) | 37.176 | 38.8467 | 41.1406 | 39.9502 |
CAR15 | Developing grain, bracts removed (15 DPA) | 28.999 | 32.3685 | 30.5288 | 72.9621 |
CDS Structure of MLOC_72715
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72715.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g45440.2 |
+3 |
7e-156 |
451 |
213/240 (89%) |
13106.m04789 protein haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed |
TAIR PP10 |
AT5G44730.1 |
+3 |
4e-125 |
371 |
174/238 (73%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:18045588-18046519 REVERSE LENGTH=255 |