MLOC_72691 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.232623.913623.826424.7163
LEAShoots from the seedlings (10 cm shoot stage)474.207774.6381125.2659.134
INF1Young developing inflorescences (5mm)15.676816.353721.341616.7022
INF2Developing inflorescences (1-1.5 cm)19.856322.511826.02927.209
ROORoots from the seedlings (10 cm shoot stage)3.065455.2449212.25596.79536
NODDeveloping tillers at six leaf stage, 3rd internode318.108483.091616.7151375.47
CAR5Developing grain, bracts removed (5 DPA)77.972390.191977.908988.2996
CAR15Developing grain, bracts removed (15 DPA)7.484169.506877.753722.372



CDS Structure of MLOC_72691






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72691.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357796NoneNoneNoneNone
MLOC_72691.1CUST_6184_PI427708080AvailableAvailablecontig_62147 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g36080.1 +2 2e-66 211 155/218 (71%) 13107.m03695 protein oxygen evolving enhancer protein 3 domain containing protein, expressed
TAIR PP10 AT4G21280.1 +2 4e-52 174 114/166 (69%) | Symbols: PSBQ, PSBQA, PSBQ-1 | photosystem II subunit QA | chr4:11334446-11335587 FORWARD LENGTH=223