- Predicted Gene MLOC_72682
MLOC_72682 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.01806 | 3.28672 | 3.29986 | 3.48123 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.47127 | 0.295733 | 1.25658 | 0.818894 |
| INF1 | Young developing inflorescences (5mm) | 5.35865 | 7.09576 | 6.31227 | 4.7208 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.4856 | 5.61404 | 4.6022 | 4.93488 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.08132 | 2.70481 | 1.00223 | 2.34205 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.14492 | 3.64758 | 2.16013 | 9.48491 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.50214 | 2.27788 | 1.89288 | 1.65436 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.244587 | 0.29721 | 0.356156 | 0.600489 |
CDS Structure of MLOC_72682
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72682.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g30780.1 |
-3 |
5e-36 |
103 |
53/136 (39%) |
13112.m03136 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT3G09510.1 |
-3 |
3e-14 |
76 |
40/112 (36%) |
Ribonuclease H-like superfamily protein | chr3:2921804-2923258 FORWARD LENGTH=484 |