MLOC_72670 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.09340170.3987150.1570170.265393
LEAShoots from the seedlings (10 cm shoot stage)3.981847.334639.860755.4292
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.03797770.0312338
ROORoots from the seedlings (10 cm shoot stage)0.5379650.1946530.2054930.261412
NODDeveloping tillers at six leaf stage, 3rd internode0.3848230.4213870.1482920.872066
CAR5Developing grain, bracts removed (5 DPA)3.560974.094424.350564.05424
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_72670






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72670.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373720NoneNoneNoneNone
MLOC_72670.1CUST_13529_PI427708083AvailableAvailablecontig_62088 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g36930.1 -2 2e-120 357 194/258 (75%) 13109.m03650 protein aquaporin protein, putative, expressed
TAIR PP10 AT3G54820.1 -2 4e-105 317 169/270 (63%) | Symbols: PIP2D, PIP2;5 | plasma membrane intrinsic protein 2;5 | chr3:20302117-20303738 FORWARD LENGTH=286