MLOC_72660 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.502492.132873.024852.8496
LEAShoots from the seedlings (10 cm shoot stage)0.6744220.2748980.3223330.358689
INF1Young developing inflorescences (5mm)0.09537580.02782050.03034790.046533
INF2Developing inflorescences (1-1.5 cm)0.02571410.024146400.0364314
ROORoots from the seedlings (10 cm shoot stage)3.70762.77352.384953.43633
NODDeveloping tillers at six leaf stage, 3rd internode0.1454490.1366580.05532760.355019
CAR5Developing grain, bracts removed (5 DPA)0.40130.4075340.2719280.380343
CAR15Developing grain, bracts removed (15 DPA)1.307731.035291.505953.30301



CDS Structure of MLOC_72660






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72660.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72660.1CUST_9761_PI427708083AvailableAvailablecontig_62069 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49300.1 -2 4e-75 248 127/171 (74%) 13106.m05266 protein glycosyltransferase protein, putative, expressed
TAIR PP10 AT3G18170.1 -2 3e-37 142 75/171 (44%) Glycosyltransferase family 61 protein | chr3:6228393-6229547 FORWARD LENGTH=384