MLOC_72650 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.5025190.3751530.1991480.390569
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_72650






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72650.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72650.1CUST_9759_PI427708083AvailableAvailablecontig_62050 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g53790.1 +2 3e-72 233 117/162 (72%) 13103.m05881 protein periplasmic beta-glucosidase precursor, putative, expressed
TAIR PP10 AT5G04885.1 +2 4e-51 175 92/158 (58%) Glycosyl hydrolase family protein | chr5:1423369-1426628 FORWARD LENGTH=665