- Predicted Gene MLOC_72643
MLOC_72643 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.03227 | 6.43937 | 7.42396 | 6.85789 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.19628 | 7.54461 | 8.24054 | 6.35031 |
| INF1 | Young developing inflorescences (5mm) | 15.0083 | 13.3959 | 14.2643 | 11.332 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.3391 | 11.7756 | 9.48031 | 11.347 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.35026 | 6.10179 | 5.1641 | 7.24232 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.46467 | 3.46968 | 5.7999 | 12.8678 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.52092 | 7.45963 | 8.29167 | 7.27825 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.67654 | 2.78998 | 2.71988 | 5.71036 |
CDS Structure of MLOC_72643
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72643.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g43980.1 |
-1 |
3e-133 |
397 |
209/256 (82%) |
13107.m04623 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT1G16280.1 |
-1 |
2e-91 |
288 |
154/260 (59%) |
| Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | chr1:5568482-5570487 REVERSE LENGTH=491 |