- Predicted Gene MLOC_72638
MLOC_72638 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.69999 | 2.58157 | 2.28928 | 2.97717 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.438297 | 0 | 0 | 0.389984 |
| INF1 | Young developing inflorescences (5mm) | 0.341432 | 0 | 0.276136 | 0.209996 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.45491 | 0.790266 | 0.64289 | 0.857989 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.15253 | 3.21958 | 3.73284 | 4.27433 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0369852 | 0.0114159 | 0.0326507 | 0.0425138 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 23.6062 | 31.6506 | 23.3605 | 30.7018 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.24104 | 5.32446 | 4.72643 | 14.3022 |
CDS Structure of MLOC_72638
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72638.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g51200.1 |
-2 |
2e-53 |
174 |
109/119 (92%) |
13103.m05566 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
| TAIR PP10 |
AT1G54690.1 |
-2 |
7e-53 |
171 |
110/120 (92%) |
| Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX | gamma histone variant H2AX | chr1:20414607-20415206 REVERSE LENGTH=142 |