MLOC_72636 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.531315.69176.718345.2893
LEAShoots from the seedlings (10 cm shoot stage)6.1999.07187.077115.3995
INF1Young developing inflorescences (5mm)8.229247.710455.930915.80684
INF2Developing inflorescences (1-1.5 cm)8.25155.98436.310716.93923
ROORoots from the seedlings (10 cm shoot stage)20.341116.400511.244116.2988
NODDeveloping tillers at six leaf stage, 3rd internode4.876764.562763.843512.0632
CAR5Developing grain, bracts removed (5 DPA)8.284047.223615.61816.18838
CAR15Developing grain, bracts removed (15 DPA)2.570632.158122.196895.18835



CDS Structure of MLOC_72636






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72636.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252645.1NoneNoneNoneNone
MLOC_72636.1CUST_6176_PI427708080AvailableAvailablecontig_62019 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g36490.2 +1 3e-149 444 230/395 (58%) 13102.m03981 protein expressed protein
TAIR PP10 AT1G34580.1 +1 6e-24 106 90/377 (24%) Major facilitator superfamily protein | chr1:12660631-12663553 FORWARD LENGTH=506