- Predicted Gene MLOC_72635
MLOC_72635 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72635_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.52196 | 2.13025 | 1.91907 | 2.4418 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.37088 | 0.113209 | 0.245936 | 0.464824 |
INF1 | Young developing inflorescences (5mm) | 7.58077 | 8.06147 | 7.86021 | 7.65327 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.57819 | 8.29801 | 7.9019 | 9.78079 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.50454 | 2.01091 | 2.74633 | 2.76268 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.31935 | 0.771503 | 2.50545 | 3.1901 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.55616 | 3.58028 | 3.08412 | 3.73872 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.318728 | 0.352212 | 0.627167 | 1.20548 |
CDS Structure of MLOC_72635
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72635.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g44640.1 |
-3 |
1e-83 |
290 |
177/227 (78%) |
13104.m04463 protein ulp1 protease family, C-terminal catalytic domain containing protein, expressed |
TAIR PP10 |
AT5G37010.1 |
-3 |
1e-16 |
84 |
62/169 (37%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259 proteins in 486 species: Archae - 7; Bacteria - 485; Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50; Other Eukaryotes - 1741 (source: NCBI BLink). | chr5:14620853-14622879 REVERSE LENGTH=637 |