MLOC_72631 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.564527.745325.777620.8231
LEAShoots from the seedlings (10 cm shoot stage)28.700117.896511.725515.9927
INF1Young developing inflorescences (5mm)39.914541.775836.01229.7352
INF2Developing inflorescences (1-1.5 cm)35.004531.91831.283232.2806
ROORoots from the seedlings (10 cm shoot stage)8.4865817.874214.833417.7739
NODDeveloping tillers at six leaf stage, 3rd internode17.37313.471413.020741.7199
CAR5Developing grain, bracts removed (5 DPA)20.425519.772621.47717.8453
CAR15Developing grain, bracts removed (15 DPA)2.510052.811352.889285.46563



CDS Structure of MLOC_72631






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72631.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72631.2CUST_9755_PI427708083AvailableAvailablecontig_62015 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g34050.1 -1 2e-180 523 248/283 (88%) 13108.m03558 protein phosphofructokinase, putative
TAIR PP10 AT2G22480.1 -1 3e-101 319 156/248 (63%) | Symbols: PFK5 | phosphofructokinase 5 | chr2:9545670-9548414 FORWARD LENGTH=537