- Predicted Gene MLOC_72620
MLOC_72620 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72620_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_72620_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.13054 | 0.587056 | 1.09923 | 0.812027 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.302656 | 0.301726 | 0.304429 | 0.236737 |
INF1 | Young developing inflorescences (5mm) | 0.665683 | 0.553438 | 0.681758 | 0.583109 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.37648 | 0.674428 | 0.533484 | 0.651536 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.16733 | 0.45874 | 0.797636 | 0.74161 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.145347 | 0.0992992 | 0.097408 | 0.249319 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.658615 | 1.00263 | 0.608101 | 0.824601 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.447858 | 0.330388 | 0.141527 | 0.862749 |
CDS Structure of MLOC_72620
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72620.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g03600.1 |
+1 |
2e-117 |
348 |
196/254 (77%) |
13111.m00300 protein harpin-induced protein 1 domain containing protein, expressed |
TAIR PP10 |
AT2G27080.2 |
+1 |
9e-41 |
147 |
76/218 (35%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:11566383-11567165 FORWARD LENGTH=260 |