MLOC_72596 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.114826.192823.946328.6736
LEAShoots from the seedlings (10 cm shoot stage)70.952150.709143.663119.664
INF1Young developing inflorescences (5mm)14.071514.897817.916615.1896
INF2Developing inflorescences (1-1.5 cm)9.1601111.253110.879812.8438
ROORoots from the seedlings (10 cm shoot stage)8.857227.7178611.877711.2866
NODDeveloping tillers at six leaf stage, 3rd internode25.582828.996848.9486118.483
CAR5Developing grain, bracts removed (5 DPA)18.675919.734619.364821.4382
CAR15Developing grain, bracts removed (15 DPA)7.8430110.15216.9010122.3514



CDS Structure of MLOC_72596






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361271
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361271CUST_24421_PI427708080NoneNoneNone
MLOC_1991.1NoneAvailableNonecontig_1177347 (Not mapped)
MLOC_32353.1NoneAvailableNonecontig_227831 (Mapped)
MLOC_33601.1NoneAvailableNonecontig_2388840 (Not mapped)
MLOC_49861.1NoneAvailableNonecontig_349772 (Mapped)
MLOC_72596.3NoneAvailableAvailablecontig_61954 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----