- Predicted Gene MLOC_72589
MLOC_72589 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_72589_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_72589_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 11.8735 | 10.0263 | 8.41008 | 11.6996 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.12791 | 5.3494 | 6.44933 | 5.67431 |
INF1 | Young developing inflorescences (5mm) | 17.0173 | 19.54 | 16.7533 | 16.2378 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.0299 | 15.1924 | 16.8644 | 17.6212 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.3776 | 8.38284 | 9.43285 | 11.7776 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.313988 | 0.227159 | 0.274067 | 0.866305 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.605 | 11.2902 | 10.8388 | 11.322 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.66008 | 6.92254 | 5.53118 | 14.5344 |
CDS Structure of MLOC_72589
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72589.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g53280.2 |
-3 |
2e-80 |
241 |
118/122 (97%) |
13101.m05581 protein 50S ribosomal protein L20, putative, expressed |
TAIR PP10 |
AT1G16740.1 |
-3 |
1e-67 |
207 |
101/114 (89%) |
Ribosomal protein L20 | chr1:5727773-5728950 FORWARD LENGTH=126 |