MLOC_72579 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.958416.506818.193921.243
LEAShoots from the seedlings (10 cm shoot stage)17.251612.893219.404615.099
INF1Young developing inflorescences (5mm)6.104074.54364.180824.87891
INF2Developing inflorescences (1-1.5 cm)2.790992.153542.953323.4748
ROORoots from the seedlings (10 cm shoot stage)71.591948.916850.317772.4973
NODDeveloping tillers at six leaf stage, 3rd internode44.036255.409651.263173.35
CAR5Developing grain, bracts removed (5 DPA)14.88615.233514.63819.0599
CAR15Developing grain, bracts removed (15 DPA)2.041322.145231.526175.75464



CDS Structure of MLOC_72579






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72579.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366550NoneNoneNoneNone
MLOC_72579.1CUST_6168_PI427708080AvailableAvailablecontig_61917 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g22490.4 +2 9e-41 150 93/181 (51%) 13103.m02708 protein heavy metal-associated domain containing protein, expressed
TAIR PP10 AT1G23000.1 +2 1e-17 85 39/73 (53%) Heavy metal transport/detoxification superfamily protein | chr1:8143614-8144865 FORWARD LENGTH=358