MLOC_72559 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.777564.016924.577994.07654
LEAShoots from the seedlings (10 cm shoot stage)8.319048.299428.36217.7697
INF1Young developing inflorescences (5mm)9.944549.3100613.28879.27079
INF2Developing inflorescences (1-1.5 cm)22.13617.909222.182722.5961
ROORoots from the seedlings (10 cm shoot stage)2.933874.206113.89395.23911
NODDeveloping tillers at six leaf stage, 3rd internode6.5468510.04213.686638.6228
CAR5Developing grain, bracts removed (5 DPA)13.375713.368113.640213.2947
CAR15Developing grain, bracts removed (15 DPA)12.65019.6953510.433525.3333



CDS Structure of MLOC_72559






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72559.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72559.1CUST_15813_PI427708080AvailableAvailablecontig_61886 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73580.1 +1 0.0 813 381/517 (74%) 13101.m08029 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G55120.2 +1 1e-167 493 251/526 (48%) | Symbols: ATFRUCT5, FRUCT5 | beta-fructofuranosidase 5 | chr1:20566983-20569165 FORWARD LENGTH=555