MLOC_72542 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.239222.657083.368372.98959
LEAShoots from the seedlings (10 cm shoot stage)0.7438380.7075440.1586050.459514
INF1Young developing inflorescences (5mm)000.0214620.0204435
INF2Developing inflorescences (1-1.5 cm)0.03567190.016929500.0374689
ROORoots from the seedlings (10 cm shoot stage)16.635427.522212.088929.8673
NODDeveloping tillers at six leaf stage, 3rd internode00.008220800.0627818
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.017937200.068911



CDS Structure of MLOC_72542






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72542.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_72542.1CUST_15807_PI427708080AvailableAvailablecontig_61849 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35520.1 -2 0.0 609 317/533 (59%) 13107.m03635 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT4G26830.1 -2 8e-117 361 195/461 (42%) O-Glycosyl hydrolases family 17 protein | chr4:13494726-13496487 REVERSE LENGTH=455