MLOC_72532 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.337527.828428.15625.4166
LEAShoots from the seedlings (10 cm shoot stage)10.120910.11979.49068.48009
INF1Young developing inflorescences (5mm)3.175843.115061.748722.32308
INF2Developing inflorescences (1-1.5 cm)5.196816.077415.492186.23228
ROORoots from the seedlings (10 cm shoot stage)12.774317.235814.125919.6627
NODDeveloping tillers at six leaf stage, 3rd internode10.38528.238548.0786126.2839
CAR5Developing grain, bracts removed (5 DPA)15.995515.714417.22615.8538
CAR15Developing grain, bracts removed (15 DPA)27.7422.467126.848158.955



CDS Structure of MLOC_72532






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72532.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370861NoneNoneNoneNone
MLOC_72532.1CUST_6164_PI427708080AvailableAvailablecontig_61834 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g44210.1 -2 0.0 1403 699/729 (96%) 13105.m04666 protein trehalose-6-phosphate synthase, putative, expressed
TAIR PP10 AT1G78580.1 -2 0.0 1296 663/851 (78%) | Symbols: ATTPS1, TPS1 | trehalose-6-phosphate synthase | chr1:29552495-29557482 REVERSE LENGTH=942