- Predicted Gene MLOC_72527
MLOC_72527 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.74218 | 5.93375 | 3.59207 | 2.64259 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.75213 | 4.43108 | 3.84633 | 1.93347 |
| INF1 | Young developing inflorescences (5mm) | 5.32581 | 5.66165 | 4.47625 | 2.60287 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.41863 | 5.917 | 5.61254 | 4.01174 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.28673 | 5.50116 | 4.90648 | 3.2896 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.91784 | 2.20796 | 1.53469 | 4.90079 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.2909 | 6.32689 | 9.04389 | 4.23938 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.54101 | 2.52448 | 2.28285 | 3.37352 |
CDS Structure of MLOC_72527
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_72527.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g07450.3 |
+1 |
4e-19 |
89 |
47/90 (52%) |
13112.m00779 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT2G37160.1 |
+1 |
4e-18 |
85 |
46/91 (51%) |
Transducin/WD40 repeat-like superfamily protein | chr2:15609047-15612529 FORWARD LENGTH=544 |