MLOC_72503 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.908055.846366.144175.89265
LEAShoots from the seedlings (10 cm shoot stage)3.352787.2760620.71037.75349
INF1Young developing inflorescences (5mm)5.288946.583718.504956.07601
INF2Developing inflorescences (1-1.5 cm)4.55873.70465.535955.13589
ROORoots from the seedlings (10 cm shoot stage)13.15336.449356.370997.33244
NODDeveloping tillers at six leaf stage, 3rd internode12.97811.129229.716535.7236
CAR5Developing grain, bracts removed (5 DPA)3.618833.007933.108873.28544
CAR15Developing grain, bracts removed (15 DPA)1.244471.100841.110793.00367



CDS Structure of MLOC_72503






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72503.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358125NoneNoneNoneNone
MLOC_72503.1CUST_6160_PI427708080AvailableAvailablecontig_61787 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g44410.1 -2 0.0 1099 530/662 (80%) 13107.m04674 protein WD40-like Beta Propeller Repeat family protein, expressed
TAIR PP10 AT4G01870.1 -2 0.0 746 365/659 (55%) tolB protein-related | chr4:808473-810431 REVERSE LENGTH=652