MLOC_72498 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains231.725214.117226.472250.555
LEAShoots from the seedlings (10 cm shoot stage)77.137224.02425.406243.389
INF1Young developing inflorescences (5mm)0.1247250.07307730.0398810.0782141
INF2Developing inflorescences (1-1.5 cm)0.2800330.06516010.2898480.250622
ROORoots from the seedlings (10 cm shoot stage)94.889741.718984.03969.7439
NODDeveloping tillers at six leaf stage, 3rd internode13.625221.85464.1590759.2012
CAR5Developing grain, bracts removed (5 DPA)0.9769771.781950.9095611.53848
CAR15Developing grain, bracts removed (15 DPA)0.2631930.5941860.3361811.25393



CDS Structure of MLOC_72498






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_72498.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358674NoneNoneNoneNone
MLOC_72498.1CUST_6158_PI427708080AvailableAvailablecontig_61783 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34930.1 +3 2e-99 297 140/203 (69%) 13110.m03120 protein secretory protein, putative, expressed
TAIR PP10 AT2G15130.1 +3 3e-63 203 102/206 (50%) Plant basic secretory protein (BSP) family protein | chr2:6565154-6565831 FORWARD LENGTH=225